Lines Matching full:inpos
148 picoos_int32 inPos; /**< corresponding position in input string */
311 if (altDesc->inPos < inSeqLen) {
312 inSym = inSeq[altDesc->inPos].sym;
318 (*outRefPos) = inSeq[altDesc->inPos].pos;
320 (*nextInPos) = altDesc->inPos + 1;
324 picokfst_kfstStartPairSearch(fst,inSeq[altDesc->inPos].sym,& inSymFound,& altDesc->searchState);
329 PICOTRNS_PRINTSYM(NULL, inSeq[altDesc->inPos].sym);
346 (*outRefPos) = inSeq[altDesc->inPos].pos;
347 (*nextInPos) = altDesc->inPos + 1;
367 (*nextInPos) = altDesc->inPos;
487 ap->inPos = 0;
521 ap->inPos = nextInPos;